Alexey Kolodkin
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| Faculty or Centre | Luxembourg Centre for Systems Biomedicine | ||||
| Department | Bioinformatics Core | ||||
| Postal Address |
Université du Luxembourg 2, Avenue de l'Université L-4365 Esch-sur-Alzette |
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| Telephone | (+352) 46 66 44 6185 | ||||
| Fax | (+352) 46 66 44 36185 | ||||
Researcher in the Bioinformatics Core group (Schneider Lab).
Last updated on: Tuesday, 12 November 2019
2020
ROS networks: designs, aging, Parkinson's disease and precision therapies.; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in NPJ Systems Biology and Applications (2020)
Development and evaluation of a harmonized whole body physiologically based pharmacokinetic (PBPK) model for flutamide in rats and its extrapolation to humans.; ; ; ;
in Environmental research (2020), 182
Development and evaluation of a harmonized whole body physiologically based pharmacokinetic (PBPK) model for flutamide in rats and its extrapolation to humans; ; ; ;
in Environmental Research Journal (2020)
Advice from a systems-biology model of the corona epidemics;
in NPJ Systems Biology and Applications (2020), 6(18),
2016
Systems Biology through the Concept of Emergencein Green, Sarah (Ed.) Philosophy of Systems Biology: Perspectives from Scientists and Philosophers (History, Philosophy and Theory of the Life Sciences) (2016)
2014
Comparison of ODE-based models for reactive oxygen species regulation system; ; ;
in Proceedings of ICCSA 2014 (2014, June)
ROS-activated signaling network: dynamic modelling and design principles study; ; ; ; ; ; ; ; ;
Poster (2014, June)
ROS homeostasis in a dynamic model: How to save PD neuron?; ; ; ; ; ; ; ; ; ; ; ;
Poster (2014, December)
Macromolecular networks and intelligence in microorganisms; ; ; ; ; ; ; ;
in Frontiers in Microbiology (2014)
2013
Functional Genomics, Proteomics, Metabolomics and Bioinformatics for Systems Biology; ; ; ; ; ; ; ; ; ; ; ;
in Prokop, Ales; Csukás, Bela (Eds.) Systems Biology: Integrative Biology and Simulation Tools (2013)
Network analysis for systems biology; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Prokop, Aleš; Csukás (Eds.) Springer book in Systems Biology, Vol.1: Systems Biology:, Integrative Biology and Simulation Tools (2013)
On different aspects of network analysis in systems biology; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Systems Biology (2013), 1
Design principles study of ROS management and ROS-induced mitophagy with a kinetic model; ; ; ; ; ; ;
Poster (2013, September 27)
ROS-induced regulation of mitophagy and its failure in Parkinson’s disease; ; ; ; ; ; ; ;
Poster (2013, May)
Optimization of stress response through the nuclear receptor-mediated cortisol signalling network; ; ; ; ; ;
in Nature Communications (2013), 4
The Parkinson's Disease Map: A Framework for Integration, Curation and Exploration of Disease-related Pathways; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
Poster (2013, March 09)
2012
Emergence of the silicon human and network targeting drugs; ; ; ; ; ; ; ; ; ; ;
in European Journal of Pharmaceutical Sciences (2012), 46(4), 190-197
Understanding complexity in neurodegenerative diseases: in silico reconstruction of emergence.; ; ;
in Frontiers in Physiology (2012), 3
Computing life: Add logos to biology and bios to physics; ;
in Progress in Biophysics & Molecular Biology (2012), 111(2-3), 69-74
A kinetic model and design principles study of cellular ROS defence and its failure in Parkinson’s disease; ; ;
Poster (2012, August)
Sulfolobus Systems Biology: Cool hot design for metabolic pathways; ; ; ; ; ; ;
in Systems Biology of Microorganisms (2012)
2011
Design principles of nuclear receptor signalling: How complex networking improves signal transduction; ; ; ; ; ; ; ; ;
in Toxicology (2011), 290(2-3), 131-132
A systems biology approach towards understanding nuclear receptor interactions: Implications at the endocrine-xenobiotic signalling interface; ; ; ; ;
in Toxicology (2011), 290(2-3), 131-131
2010
Design principles of nuclear receptor signaling: how complex networking improves signal transduction.; ; ; ; ; ; ; ; ;
in Molecular Systems Biology (2010), 6
Nuclear receptors as controlling factors in chemical metabolism: Determination of regulatory signal network crucial for co-ordinating cellular response to chemicals; ; ; ; ;
in Drug Metabolism Reviews (2010), 42(1), 279-280
2009
Systems biology towards life in silico: mathematics of the control of living cells.; ; ; ; ; ; ; ; ; ; ; ; ;
in Journal of Mathematical Biology (2009), 58(1-2), 7-34
