Marek Ostaszewski
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| Faculty or Centre | Luxembourg Centre for Systems Biomedicine | ||||
| Department | Bioinformatics Core | ||||
| Postal Address |
Université du Luxembourg 6, avenue du Swing L-4367 Belvaux |
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| Campus Office | BTL, E04 260 | ||||
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| Telephone | (+352) 46 66 44 5604 | ||||
Research Associate in the Bioinformatics Core group (Schneider Lab)
Last updated on: Thursday, 15 February 2018
2022
Neurodegeneration and neuroinflammation are linked, but independent of a-synuclein inclusions, in a seeding/spreading mouse model of Parkinson's disease; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Glia (2022)
The gut microbiome molecular complex in human health and disease; ; ; ; ; ;
in Cell Host and Microbe (2022), 30(9), 1201-1206
2021
COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Molecular systems biology (2021), 17(10), 10387
2020
Fibroblast mitochondria in idiopathic Parkinson’s disease display morphological changes and enhanced resistance to depolarization; ; ; ; ; ; ; ; ; ; ;
in Scientific Reports (2020)
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Scientific Data (2020)
BioKC: a platform for quality controlled curation and annotation of systems biology models; ; ; ;
Scientific Conference (2020, September 04)
BioKC: a collaborative platform for systems biology model curation and annotation; ; ; ;
in bioRxiv (2020)
2019
Optimization ACE inhibition activity in hypertension based on random vector functional link and sine-cosine algorithm; ; ; ;
in Chemometrics and Intelligent Laboratory Systems (2019)
Closing the gap between formats for storing layout information in systems biology.; ; ; ;
in Briefings in bioinformatics (2019)
MINERVA API and plugins: opening molecular network analysis and visualization to the community.; ; ; ;
in Bioinformatics (2019)
Machine Learning to Support the Presentation of Complex Pathway Graphs.; ; ; ;
in IEEE/ACM transactions on computational biology and bioinformatics (2019)
2018
Single and Multiobjective Evolutionary Algorithms for Clustering Biomedical Information with Unknown Number of Clusters; ; ; ; ; ;
in Bioinspired Optimization Methods and Their Applications (2018)
Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms.; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in NPJ systems biology and applications (2018), 4
Community-driven roadmap for integrated disease maps.; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Briefings in bioinformatics (2018)
Clustering approaches for visual knowledge exploration in molecular interaction networks.; ; ; ;
in BMC bioinformatics (2018), 19(1), 308
2017
Computational Systems Biology Approach for the Study of Rheumatoid Arthritis: From a Molecular Map to a Dynamical Model; ; ; ; ; ; ;
in Genomics and Computational Biology (2017)
2016
Enteric neurons from Parkinson's disease patients display ex vivo aberrations in mitochondrial structure.; ; ; ; ; ; ; ; ; ;
in Scientific reports (2016), 6
Metaheuristic Based Clustering Algorithms for Biological Hypergraphs; ; ; ;
in Proceedings of META’2016, 6th International Conference on Metaheuristics and Nature Inspired computing (2016, October 27)
MINERVA—a platform for visualization and curation of molecular interaction networks; ; ; ; ; ; ; ; ; ;
in NPJ Systems Biology and Applications (2016)
Neurological Diseases from a Systems Medicine Point of View.; ;
in Methods in Molecular Biology (2016), 1386
Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases.; ; ; ; ; ; ; ;
in Big data (2016), 4(2), 97-108
2015
Staining for unphosphorylated alpha-synuclein in the colon mucosa. No difference between patients with Parkinson's disease and healthy controls; ; ; ; ; ; ; ; ;
Scientific Conference (2015, June)
Platelet mitochondrial membrane potential in Parkinson's disease.; ; ; ; ; ; ; ; ; ;
in Annals of clinical and translational neurology (2015), 2(1), 67-73
2014
Analysis of mitochondrial membrane potential in idiopathic Parkinson's disease: A case-control study; ; ; ; ; ;
Scientific Conference (2014, June 12)
Curation of complex molecular pathways of Parkinson's disease as a collaborative scientific community effort; ; ; ; ; ;
Scientific Conference (2014, June 12)
Integrating Pathways of Parkinson's Disease in a Molecular Interaction Map; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
in Molecular Neurobiology (2014)
Visualization and Classification of Protein Secondary Structures using Self-Organizing Maps; ; ; ; ;
in IEEE Symposium Series on Computational Intelligence (IEEE SSCI 2014) (2014, December)
2013
The Parkinson's Disease Map: A Framework for Integration, Curation and Exploration of Disease-related Pathways; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
Poster (2013, March 09)
2012
Evolutionary conservation and network structure characterize genes of phenotypic relevance for mitosis in human; ;
in PLoS ONE (2012), 7(5), 36488
Constructing a comprehensive map of Parkinson’s disease to elucidate underlying mechanisms of its multifaceted molecular pathology; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
Poster (2012, August)
2010
2009
Multiobjective Classification with moGEP: An Application in the Network Traffic Domain; ;
in GECCO '09: Proceedings of the 11th Annual conference on Genetic and evolutionary computation (2009)
2008
An Approach to Intrusion Detection by Means of Idiotypic Networks Paradigm; ;
in IEEE World Congress on Computational Intelligence, WCCI 2008, Congress on Evolutionary Computation CEC 2008, Honk-Kong, June (2008)
Adaptive and Dynamic Intrusion Detection by Means of Idiotypic Networks Paradigm; ;
in The 21th IEEE International Parallel and Distributed Processing Symposium (IPDPS), NIDISC Workshop. (2008)
Nature inspired Algorithm-Based Fault Tolerance on Global Computing Platforms. Application to Symbolic Regression; ;
in International Conference on Metaheuristics and Nature Inspired Computing (META'08) (2008)
2007
Coevolutionary-based Mechanisms for Network Anomaly Detection; ;
in Journal of Mathematical Modelling and Algorithms (2007), 6(3), 411-431
