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Publications

The most recent publications (2017 and 2018) of the LCSB researchers are listed below.

Download the complete publication list of the LCSB (2010-2018).

 

2018

Book Series

  • María Eugenia Curi, Lucía Carozzi, Renzo Massobrio, Sergio Nesmachnow, Grégoire Danoy, Marek Ostaszewski, Pascal Bouvry. "Single and multiobjective evolutionary algorithms for clustering biomedical information with unknown number of clusters", Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 10835 LNCS - 100-112, 10.1007/978-3-319-91641-5_9
  • Janine Habier, Patrick May, Anna Heintz-Buschart, Anubrata Ghosal, Anke K Wienecke-Baldacchino, Esther N M Nolte-'t Hoen, Paul Wilmes, Joelle V Fritz. "Extraction and Analysis of RNA Isolated from Pure Bacteria-Derived Outer Membrane Vesicles.", Bacterial Regulatory RNA, 1737 - 213-230, 10.1007/978-1-4939-7634-8_13

Conference Proceeding

  • Junyang Jin, Ye Yuan, Wei Pan, Claire Tomlin, Alex A. Webb, Jorge Gonçalves. "Identification of nonlinear sparse networks using sparse Bayesian learning", 2017 IEEE 56th Annual Conference on Decision and Control, CDC 2017, 2018-January - 6481-6486, 10.1109/CDC.2017.8264636
  • Johan Thunberg, Florian Bernard, Jorge Gonçalves. "Distributed synchronization of Euclidean transformations with guaranteed convergence", 2017 IEEE 56th Annual Conference on Decision and Control, CDC 2017, 2018-January - 3757-3762, 10.1109/CDC.2017.8264211
  • Johan Markdahl, Nicolo Colombo, Johan Thunberg, Jorge Goncalves. "Experimental design trade-offs for gene regulatory network inference: An in silico study of the yeast Saccharomyces cerevisiae cell cycle", 2017 IEEE 56th Annual Conference on Decision and Control, CDC 2017, 2018-January - 423-428, 10.1109/CDC.2017.8263701
  • Zuogong Yue, Johan Thunberg, Lennart Ljung, Jorge Goncalves. "On definition and inference of nonlinear Boolean dynamic networks", 2017 IEEE 56th Annual Conference on Decision and Control, CDC 2017, 2018-January - 429-434, 10.1109/CDC.2017.8263702
  • Ioannis Tzortzis, Christoforos N. Hadjicostis, Laurent Mombaerts. "Reconstruction of gene regulatory networks using an error filtering learning scheme", 55th Annual Allerton Conference on Communication, Control, and Computing, Allerton 2017, 2018-January - 244-251, 10.1109/ALLERTON.2017.8262744
  • Maria Biryukov, Valentin Grouès, Venkata Satagopam, Reinhard Schneider. "BioKB - Text Mining and Semantic Technologies for Biomedical Content Discovery", CEUR Workshop Proceedings, 2042 - 

Journal

  • Alice S Chen-Plotkin, Roger Albin, Roy Alcalay, Debra Babcock, Vikram Bajaj, Dubois Bowman, Alex Buko, Jesse Cedarbaum, Daniel Chelsky, Mark R Cookson, Ted M Dawson, Richard Dewey, Tatiana Foroud, Mark Frasier, Dwight German, Katrina Gwinn, Xuemei Huang, Catherine Kopil, Thomas Kremer, Shirley Lasch, Ken Marek, Jarrod A Marto, Kalpana Merchant, Brit Mollenhauer, Anna Naito, Judith Potashkin, Alyssa Reimer, Liana S Rosenthal, Rachel Saunders-Pullman, Clemens R Scherzer, Todd Sherer, Andrew Singleton, Margaret Sutherland, Ines Thiele, Marcel van der Brug, Kendall Van Keuren-Jensen, David Vaillancourt, David Walt, Andrew West, Jing Zhang. "Finding useful biomarkers for Parkinson's disease.", Science Translational Medicine, 10 - (454) - 10.1126/scitranslmed.aam6003
  • Julia Becker-Kettern, Nicole Paczia, Jean-Francois Conrotte, Chenchen Zhu, Oliver Fiehn, Paul P Jung, Lars M Steinmetz, Carole L Linster. "NAD(P)HX repair deficiency causes central metabolic perturbations in yeast and human cells.", Febs Journal, 10.1111/febs.14631
  • Maryam Chaib De Mares, Diego Javier Jimenez, Giorgia Palladino, Johanna Gutleben, Laura A Lebrun, Emilie E L Muller, Paul Wilmes, Detmer Sipkema, Jan Dirk van Elsas. "Expressed protein profile of a Tectomicrobium and other microbial symbionts in the marine sponge Aplysina aerophoba as evidenced by metaproteomics.", Scientific Reports, 8 - (1) - 11795, 10.1038/s41598-018-30134-0
  • Soren Bellenberg, Antoine Buetti-Dinh, Vanni Galli, Olga Ilie, Malte Herold, Stephan Christel, Mariia Boretska, Igor V Pivkin, Paul Wilmes, Wolfgang Sand, Mario Vera, Mark Dopson. "Automated microscopical analysis of metal sulfide colonization by acidophilic microorganisms.", Applied And Environmental Microbiology, 10.1128/AEM.01835-18
  • Eugen Bauer, Ines Thiele. "From metagenomic data to personalized in silico microbiotas: predicting dietary supplements for Crohn's disease.", Npj Systems Biology And Applications, 4 - 27, 10.1038/s41540-018-0063-2
  • Patrick May, Simon Girard, Merle Harrer, Dheeraj R. Bobbili, Julian Schubert, Stefan Wolking, Felicitas Becker, Pamela Lachance-Touchette, Caroline Meloche, Micheline Gravel, Cristina E. Niturad, Julia Knaus, Carolien De Kovel, Mohamad Toliat, Anne Polvi, Michele Iacomino, Rosa Guerrero-López, Stéphanie Baulac, Carla Marini, Holger Thiele, Janine Altmüller, Kamel Jabbari, Ann Kathrin Ruppert, Wiktor Jurkowski, Dennis Lal, Raffaella Rusconi, Sandrine Cestèle, Benedetta Terragni, Ian D. Coombs, Christopher A. Reid, Pasquale Striano, Hande Caglayan, Auli Siren, Kate Everett, Rikke S. Møller, Helle Hjalgrim, Hiltrud Muhle, Ingo Helbig, Wolfram S. Kunz, Yvonne G. Weber, Sarah Weckhuysen, Peter De Jonghe, Sanjay M. Sisodiya, Rima Nabbout, Silvana Franceschetti, Antonietta Coppola, Maria S. Vari, Dorothée Kasteleijn-Nolst Trenité, Betul Baykan, Ugur Ozbek, Nerses Bebek, Karl M. Klein, Felix Rosenow, Dang K. Nguyen, François Dubeau, Lionel Carmant, Anne Lortie, Richard Desbiens, Jean François Clément, Cécile Cieuta-Walti, Graeme J. Sills, Pauls Auce, Ben Francis, Michael R. Johnson, Anthony G. Marson, Bianca Berghuis, Josemir W. Sander, Andreja Avbersek, Mark McCormack, Gianpiero L. Cavalleri, Norman Delanty, Chantal Depondt, Martin Krenn, Fritz Zimprich, Sarah Peter, Marina Nikanorova, Robert Kraaij, Jeroen van Rooij, Rudi Balling, M. Arfan Ikram, André G. Uitterlinden, Giuliano Avanzini, Stephanie Schorge, Steven Petrou, Massimo Mantegazza, Thomas Sander, Eric LeGuern, Jose M. Serratosa, Bobby P.C. Koeleman, Aarno Palotie, Anna Elina Lehesjoki, Michael Nothnagel, Peter Nürnberg, Snezana Maljevic, Federico Zara, Patrick Cossette, Roland Krause, Holger Lerche. "Rare coding variants in genes encoding GABA A receptors in genetic generalised epilepsies: an exome-based case-control study", Lancet Neurology, 17 - (8) - 699-708, 10.1016/S1474-4422(18)30215-1
  • Nevenka Dudvarski Stankovic, Frank Bicker, Stefanie Keller, David Tw Jones, Patrick N Harter, Arne Kienzle, Clarissa Gillmann, Philipp Arnold, Anna Golebiewska, Olivier Keunen, Alf Giese, Andreas von Deimling, Tobias Bauerle, Simone P Niclou, Michel Mittelbronn, Weilan Ye, Stefan M Pfister, Mirko Hh Schmidt. "EGFL7 enhances surface expression of integrin alpha5beta1 to promote angiogenesis in malignant brain tumors.", Embo Molecular Medicine, 10 - (8) - 10.15252/emmm.201708420
  • Nina Meyer, Svenja Zielke, Jonas B Michaelis, Benedikt Linder, Verena Warnsmann, Stefanie Rakel, Heinz D Osiewacz, Simone Fulda, Michel Mittelbronn, Christian Munch, Christian Behrends, Donat Kogel. "AT 101 induces early mitochondrial dysfunction and HMOX1 (heme oxygenase 1) to trigger mitophagic cell death in glioma cells.", Autophagy, 1-17, 10.1080/15548627.2018.1476812
  • Johan Thunberg, Johan Markdahl, Florian Bernard, Jorge Goncalves. "A lifting method for analyzing distributed synchronization on the unit sphere", Automatica, 96 - 253-258, 10.1016/j.automatica.2018.07.007
  • Magdalena Calusinska, Xavier Goux, Marie Fossepre, Emilie E L Muller, Paul Wilmes, Philippe Delfosse. "A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems.", Biotechnology For Biofuels, 11 - (1) - 196, 10.1186/s13068-018-1195-8
  • Jens C Schwamborn. "Is Parkinson's Disease a Neurodevelopmental Disorder and Will Brain Organoids Help Us to Understand It?", Stem Cells And Development, 27 - (14) - 968-975, 10.1089/scd.2017.0289
  • Mirta Borin, Claudia Saraceno, Marcella Catania, Erika Lorenzetto, Valeria Pontelli, Anna Paterlini, Silvia Fostinelli, Anna Avesani, Giuseppe Di Fede, Gianluigi Zanusso, Luisa Benussi, Giuliano Binetti, Simone Zorzan, Roberta Ghidoni, Mario Buffelli, Silvia Bolognin. "Rac1 activation links tau hyperphosphorylation and Abeta dysmetabolism in Alzheimer's disease.", Acta Neuropathologica Communications, 6 - (1) - 61, 10.1186/s40478-018-0567-4
  • Daniela Hartl, Patrick May, Wei Gu, Manuel Mayhaus, Sabrina Pichler, Christian Spaniol, Enrico Glaab, Dheeraj Reddy Bobbili, Paul Antony, Sandra Koegelsberger, Alexander Kurz, Timo Grimmer, Kevin Morgan, Badri N Vardarajan, Christiane Reitz, John Hardy, Jose Bras, Rita Guerreiro, Rudi Balling, Jochen G Schneider, Matthias Riemenschneider, AESG. "A rare loss-of-function variant of ADAM17 is associated with late-onset familial Alzheimer disease.", Molecular Psychiatry, 1-11, 10.1038/s41380-018-0091-8
  • Lin Wang, Johan Markdahl, Zhixin Liu, Xiaoming Hu. "Decentralized cooperative tracking subject to motion constraints", Automatica, 96 - 121-126, 10.1016/j.automatica.2018.06.037
  • Satoshi Okawa, Carmen Salto, Srikanth Ravichandran, Shanzheng Yang, Enrique M Toledo, Ernest Arenas, Antonio Del Sol. "Transcriptional synergy as an emergent property defining cell subpopulation identity enables population shift.", Nature Communications, 9 - (1) - 2595, 10.1038/s41467-018-05016-8
  • Asad Jan, Brandon Jansonius, Alberto Delaidelli, Forum Bhanshali, Yi Andy An, Nelson Ferreira, Lisa M Smits, Gian Luca Negri, Jens C Schwamborn, Poul H Jensen, Ian R Mackenzie, Stefan Taubert, Poul H Sorensen. "Activity of translation regulator eukaryotic elongation factor-2 kinase is increased in Parkinson disease brain and its inhibition reduces alpha synuclein toxicity.", Acta Neuropathologica Communications, 6 - (1) - 54, 10.1186/s40478-018-0554-9
  • Andrzej Mizera, Jun Pang, Hongyang Qu, Qixia Yuan. "Taming Asynchrony for Attractor Detection in Large Boolean Networks", Ieee-Acm Transactions On Computational Biology And Bioinformatics, 14 - (8) - 10.1109/TCBB.2018.2850901
  • Henrike O Heyne, Tarjinder Singh, Hannah Stamberger, Rami Abou Jamra, Hande Caglayan, Dana Craiu, Peter De Jonghe, Renzo Guerrini, Katherine L Helbig, Bobby P C Koeleman, Jack A Kosmicki, Tarja Linnankivi, Patrick May, Hiltrud Muhle, Rikke S Moller, Bernd A Neubauer, Aarno Palotie, Manuela Pendziwiat, Pasquale Striano, Sha Tang, Sitao Wu, Annapurna Poduri, Yvonne G Weber, Sarah Weckhuysen, Sanjay M Sisodiya, Mark J Daly, Ingo Helbig, Dennis Lal, Johannes R Lemke, EuroEPINOMICS RES Consortium. "De novo variants in neurodevelopmental disorders with epilepsy.", Nature Genetics, 50 - (7) - 1048-1053, 10.1038/s41588-018-0143-7
  • Atte Aalto. "Convergence of discrete-time Kalman filter estimate to continuous-time estimate for systems with unbounded observation", Mathematics Of Control Signals And Systems, 30 - (3) - 10.1007/s00498-018-0214-4
  • David Hoksza, Piotr Gawron, Marek Ostaszewski, Reinhard Schneider. "MolArt: A molecular structure annotation and visualization tool.", Bioinformatics, 10.1093/bioinformatics/bty489
  • Sarah Nicklas, Anna-Lena Hillje, Satoshi Okawa, Ina-Maria Rudolph, Franziska Melanie Collmann, Thea van Wuellen, Antonio Del Sol, Jens C Schwamborn. "A complex of the ubiquitin ligase TRIM32 and the deubiquitinase USP7 balances the level of c-Myc ubiquitination and thereby determines neural stem cell fate specification.", Cell Death And Differentiation, 1-13, 10.1038/s41418-018-0144-1
  • Agnieszka J Szczepek, Lidia Frejo, Barbara Vona, Natalia Trpchevska, Christopher R Cederroth, Helena Caria, Jose A Lopez-Escamez. "Recommendations on Collecting and Storing Samples for Genetic Studies in Hearing and Tinnitus Research.", Ear And Hearing, 10.1097/AUD.0000000000000614
  • Alexander Mazein, Marek Ostaszewski, Inna Kuperstein, Steven Watterson, Nicolas Le Novère, Diane Lefaudeux, Bertrand De Meulder, Johann Pelle, Irina Balaur, Mansoor Saqi, Maria Manuela Nogueira, Feng He, Andrew Parton, Nathanaël Lemonnier, Piotr Gawron, Stephan Gebel, Pierre Hainaut, Markus Ollert, Ugur Dogrusoz, Emmanuel Barillot, Andrei Zinovyev, Reinhard Schneider, Rudi Balling, Charles Auffray. "Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms", Npj Systems Biology And Applications, 4 - 21, 10.1038/s41540-018-0059-y
  • Idil Hanci, Christoph Kamm, Marlieke Scholten, Lorenzo P. Roncoroni, Yvonne Weber, Rejko Krüger, Christian Plewnia, Alireza Gharabaghi, Daniel Weiss. "Long-term effect of GPi-DBS in a patient with generalized dystonia due to GLUT1 deficiency syndrome", Frontiers In Neurology, 9 - (MAY) - 381, 10.3389/fneur.2018.00381
  • Samuel J Atkinson, Aleksander M Gontarczyk, Abdullah Aa Alghamdi, Tim S Ellison, Robert T Johnson, Wesley J Fowler, Benjamin M Kirkup, Bernardo C Silva, Bronwen E Harry, Jochen G Schneider, Katherine N Weilbaecher, Mette M Mogensen, Mark D Bass, Maddy Parsons, Dylan R Edwards, Stephen D Robinson. "The beta3-integrin endothelial adhesome regulates microtubule-dependent cell migration.", Embo Reports, 19 - (7) - 10.15252/embr.201744578
  • Peter Baumgarten, Johanna Quick-Weller, Florian Gessler, Marlies Wagner, Julia Tichy, Marie-Therese Forster, Christian Foerch, Volker Seifert, Michel Mittelbronn, Christian Senft. "Pre- and early postoperative GFAP serum levels in glioma and brain metastases.", Journal Of Neuro-Oncology, 1-6, 10.1007/s11060-018-2898-1
  • Jan-Philip Medelnik, Kathleen Roensch, Satoshi Okawa, Antonio Del Sol, Osvaldo Chara, Levan Mchedlishvili, Elly M Tanaka. "Signaling-Dependent Control of Apical Membrane Size and Self-Renewal in Rosette-Stage Human Neuroepithelial Stem Cells.", Stem Cell Reports, 10 - (6) - 1751-1765, 10.1016/j.stemcr.2018.04.018
  • Anna Heintz-Buschart, Dilmurat Yusuf, Anne Kaysen, Alton Etheridge, Joelle V Fritz, Patrick May, Carine de Beaufort, Bimal B Upadhyaya, Anubrata Ghosal, David J Galas, Paul Wilmes. "Small RNA profiling of low biomass samples: identification and removal of contaminants.", Bmc Biology, 16 - (1) - 52, 10.1186/s12915-018-0522-7
  • Lisa Mader, Anna E Blank, David Capper, Janina Jansong, Peter Baumgarten, Naita M Wirsik, Cornelia Zachskorn, Jakob Ehlers, Michael Seifert, Barbara Klink, Stefan Liebner, Simone Niclou, Ulrike Naumann, Patrick N Harter, Michel Mittelbronn. "Pericytes/vessel-associated mural cells (VAMCs) are the major source of key epithelial-mesenchymal transition (EMT) factors SLUG and TWIST in human glioma.", Oncotarget, 9 - (35) - 24041-24053, 10.18632/oncotarget.25275
  • Stefano Magni, Antonella Succurro, Alexander Skupin, Oliver Ebenhoh. "Data-driven dynamical model indicates that the heat shock response in Chlamydomonas reinhardtii is tailored to handle natural temperature variation.", Journal Of The Royal Society, Interface, 15 - (142) - 10.1098/rsif.2017.0965
  • Theo Brillatz, Chiara Lauritano, Maxime Jacmin, Supitcha Khamma, Laurence Marcourt, Davide Righi, Giovanna Romano, Francesco Esposito, Adrianna Ianora, Emerson F Queiroz, Jean-Luc Wolfender, Alexander D Crawford. "Zebrafish-based identification of the antiseizure nucleoside inosine from the marine diatom Skeletonema marinoi.", Plos One, 13 - (4) - e0196195, 10.1371/journal.pone.0196195
  • Marek Ostaszewski, Stephan Gebel, Inna Kuperstein, Alexander Mazein, Andrei Zinovyev, Ugur Dogrusoz, Jan Hasenauer, Ronan M. T. Fleming, Nicolas Le Novère, Piotr Gawron, Thomas Ligon, Anna Niarakis, David Nickerson, Daniel Weindl, Rudi Balling, Emmanuel Barillot, Charles Auffray, Reinhard Schneider. "Community-driven roadmap for integrated disease maps", Briefings In Bioinformatics, 10.1093/bib/bby024
  • Martin Falcke, Mahsa Moein, Agne Tilunaite, Rüdiger Thul, Alexander Skupin. "On the phase space structure of IP3 induced Ca2+ signalling and concepts for predictive modeling", Chaos, 28 - (4) - 10.1063/1.5021073
  • Anne Grosse-Wilde, Rolf E Kuestner, Stephanie M Skelton, Ellie MacIntosh, Aymeric Fouquier d'Herouel, Gokhan Ertaylan, Antonio Del Sol, Alexander Skupin, Sui Huang. "Loss of inter-cellular cooperation by complete epithelial-mesenchymal transition supports favorable outcomes in basal breast cancer patients.", Oncotarget, 9 - (28) - 20018-20033, 10.18632/oncotarget.25034
  • David Pamies, Anna Bal-Price, Christophe Chesne, Sandra Coecke, Andras Dinnyes, Chantra Eskes, Regina Grillari, Gerhard Gstraunthaler, Thomas Hartung, Paul Jennings, Marcel Leist, Ulrich Martin, Robert Passier, Jens C Schwamborn, Glyn N Stacey, Heidrun Ellinger-Ziegelbauer, Mardas Daneshian. "Advanced Good Cell Culture Practice for human primary, stem cell-derived and organoid models as well as microphysiological systems.", Altex-Alternatives To Animal Experimentation, 35 - (3) - 353-378, 10.14573/altex.1712221
  • Lidia Frejo, Alvaro Gallego-Martinez, Teresa Requena, Eduardo Martin-Sanz, Juan Carlos Amor-Dorado, Andres Soto-Varela, Sofia Santos-Perez, Juan Manuel Espinosa-Sanchez, Angel Batuecas-Caletrio, Ismael Aran, Jesus Fraile, Marcos Rossi-Izquierdo, Jose Antonio Lopez-Escamez. "Proinflammatory cytokines and response to molds in mononuclear cells of patients with Meniere disease.", Scientific Reports, 8 - (1) - 5974, 10.1038/s41598-018-23911-4
  • Mahsa Moein, Kamil Grzyb, Teresa Goncalves Martins, Shinya Komoto, Francesca Peri, Alexander Crawford, Aymeric Fouquier d'Herouel, Alexander Skupin. "CaSiAn: a Calcium Signaling Analyzer tool.", Bioinformatics, 10.1093/bioinformatics/bty281
  • Teresa Requena, Alvaro Gallego-Martinez, Jose A Lopez-Escamez. "Bioinformatic Integration of Molecular Networks and Major Pathways Involved in Mice Cochlear and Vestibular Supporting Cells.", Frontiers In Molecular Neuroscience, 11 - 108, 10.3389/fnmol.2018.00108
  • Andrew E Laloo, Justin Wei, Dongbo Wang, Shaman Narayanasamy, Inka Vanwonterghem, David Waite, Jason Steen, Anne Kaysen, Anna Heintz-Buschart, Qilin Wang, Benjamin Schulz, Amanda Nouwens, Paul Wilmes, Philip Hugenholtz, Zhiguo Yuan, Philip L Bond. "Mechanisms of Persistence of the Ammonia-Oxidizing Bacteria Nitrosomonas to the Biocide Free Nitrous Acid.", Environmental Science & Technology, 52 - (9) - 5386-5397, 10.1021/acs.est.7b04273
  • Nikiforos A Alygizakis, Saer Samanipour, Juliane Hollender, Maria Ibanez, Sarit Kaserzon, Varvara Kokkali, Jan A van Leerdam, Jochen F Mueller, Martijn Pijnappels, Malcolm J Reid, Emma L Schymanski, Jaroslav Slobodnik, Nikolaos S Thomaidis, Kevin V Thomas. "Exploring the Potential of a Global Emerging Contaminant Early Warning Network through the Use of Retrospective Suspect Screening with High-Resolution Mass Spectrometry.", Environmental Science & Technology, 52 - (9) - 5135-5144, 10.1021/acs.est.8b00365
  • Johan Thunberg, Johan Markdahl, Jorge Gonçalves. "Dynamic controllers for column synchronization of rotation matrices: A QR-factorization approach", Automatica, 93 - 20-25, 10.1016/j.automatica.2018.03.023
  • Eugen Bauer, Ines Thiele. "From Network Analysis to Functional Metabolic Modeling of the Human Gut Microbiota.", Msystems, 3 - (3) - 1-13, 10.1128/mSystems.00209-17
  • Alvaro Gallego-Martinez, Juan Manuel Espinosa-Sanchez, Jose Antonio Lopez-Escamez. "Genetic contribution to vestibular diseases.", Journal Of Neurology, 1-6, 10.1007/s00415-018-8842-7
  • Patrick May, Sabrina Pichler, Daniela Hartl, Dheeraj R. Bobbili, Manuel Mayhaus, Christian Spaniol, Alexander Kurz, Rudi Balling, Jochen G. Schneider, Matthias Riemenschneider. "Rare ABCA7 variants in 2 German families with Alzheimer disease", Neurology. Genetics, 4 - (2) - e224, 10.1212/NXG.0000000000000224
  • Stephen J Holland, Lesley M Berghuis, Justin J King, Lakshminarayan M Iyer, Katarzyna Sikora, Heather Fifield, Sarah Peter, Emma M Quinlan, Fumiaki Sugahara, Prashant Shingate, Ines Trancoso, Norimasa Iwanami, Elena Temereva, Christine Strohmeier, Shigeru Kuratani, Byrappa Venkatesh, Guillaume Evanno, L Aravind, Michael Schorpp, Mani Larijani, Thomas Boehm. "Expansions, diversification, and interindividual copy number variations of AID/APOBEC family cytidine deaminase genes in lampreys.", Proceedings Of The National Academy Of Sciences Of The United States Of America, 115 - (14) - E3211-E3220, 10.1073/pnas.1720871115
  • David Capper, David T W Jones, Martin Sill, Volker Hovestadt, Daniel Schrimpf, Dominik Sturm, Christian Koelsche, Felix Sahm, Lukas Chavez, David E Reuss, Annekathrin Kratz, Annika K Wefers, Kristin Huang, Kristian W Pajtler, Leonille Schweizer, Damian Stichel, Adriana Olar, Nils W Engel, Kerstin Lindenberg, Patrick N Harter, Anne K Braczynski, Karl H Plate, Hildegard Dohmen, Boyan K Garvalov, Roland Coras, Annett Holsken, Ekkehard Hewer, Melanie Bewerunge-Hudler, Matthias Schick, Roger Fischer, Rudi Beschorner, Jens Schittenhelm, Ori Staszewski, Khalida Wani, Pascale Varlet, Melanie Pages, Petra Temming, Dietmar Lohmann, Florian Selt, Hendrik Witt, Till Milde, Olaf Witt, Eleonora Aronica, Felice Giangaspero, Elisabeth Rushing, Wolfram Scheurlen, Christoph Geisenberger, Fausto J Rodriguez, Albert Becker, Matthias Preusser, Christine Haberler, Rolf Bjerkvig, Jane Cryan, Michael Farrell, Martina Deckert, Jurgen Hench, Stephan Frank, Jonathan Serrano, Kasthuri Kannan, Aristotelis Tsirigos, Wolfgang Bruck, Silvia Hofer, Stefanie Brehmer, Marcel Seiz-Rosenhagen, Daniel Hanggi, Volkmar Hans, Stephanie Rozsnoki, Jordan R Hansford, Patricia Kohlhof, Bjarne W Kristensen, Matt Lechner, Beatriz Lopes, Christian Mawrin, Ralf Ketter, Andreas Kulozik, Ziad Khatib, Frank Heppner, Arend Koch, Anne Jouvet, Catherine Keohane, Helmut Muhleisen, Wolf Mueller, Ute Pohl, Marco Prinz, Axel Benner, Marc Zapatka, Nicholas G Gottardo, Pablo Hernaiz Driever, Christof M Kramm, Hermann L Muller, Stefan Rutkowski, Katja von Hoff, Michael C Fruhwald, Astrid Gnekow, Gudrun Fleischhack, Stephan Tippelt, Gabriele Calaminus, Camelia-Maria Monoranu, Arie Perry, Chris Jones, Thomas S Jacques, Bernhard Radlwimmer, Marco Gessi, Torsten Pietsch, Johannes Schramm, Gabriele Schackert, Manfred Westphal, Guido Reifenberger, Pieter Wesseling, Michael Weller, Vincent Peter Collins, Ingmar Blumcke, Martin Bendszus, Jurgen Debus, Annie Huang, Nada Jabado, Paul A Northcott, Werner Paulus, Amar Gajjar, Giles W Robinson, Michael D Taylor, Zane Jaunmuktane, Marina Ryzhova, Michael Platten, Andreas Unterberg, Wolfgang Wick, Matthias A Karajannis, Michel Mittelbronn, Till Acker, Christian Hartmann, Kenneth Aldape, Ulrich Schuller, Rolf Buslei, Peter Lichter, Marcel Kool, Christel Herold-Mende, David W Ellison, Martin Hasselblatt, Matija Snuderl, Sebastian Brandner, Andrey Korshunov, Andreas von Deimling, Stefan M Pfister. "DNA methylation-based classification of central nervous system tumours.", Nature, 555 - (7697) - 469-474, 10.1038/nature26000
  • Paul P. Jung, Zhi Zhang, Nicole Paczia, Christian Jaeger, Tomasz Ignac, Patrick May, Carole L. Linster. "Natural variation of chronological aging in the Saccharomyces cerevisiae species reveals diet-dependent mechanisms of life span control", Npj Aging And Mechanisms Of Disease, 4 - (1) - 3, 10.1038/s41514-018-0022-6
  • Nicole Salazar, Jeffrey C Carlson, Kexin Huang, Yayue Zheng, Cecilia Oderup, Julia Gross, Andrew D Jang, Thomas M Burke, Susanna Lewen, Alexander Scholz, Serina Huang, Leona Nease, Jon Kosek, Michel Mittelbronn, Eugene C Butcher, Hua Tu, Brian A Zabel. "A Chimeric Antibody against ACKR3/CXCR7 in Combination with TMZ Activates Immune Responses and Extends Survival in Mouse GBM Models.", Molecular Therapy, 26 - (5) - 1354-1365, 10.1016/j.ymthe.2018.02.030
  • Srikanth Ravichandran, Alessandro Michelucci, Antonio Del Sol. "Integrative Computational Network Analysis Reveals Site-Specific Mediators of Inflammation in Alzheimer's Disease.", Frontiers In Physiology, 9 - (MAR) - 154, 10.3389/fphys.2018.00154
  • Tiina Murtola, Atte Aalto, Jarmo Malinen, Daniel Aalto, Martti Vainio. "Modal locking between vocal fold oscillations and vocal tract acoustics", Acta Acustica United With Acustica, 104 - (2) - 323-327, 10.3813/AAA.919175
  • P S Zeiner, J Zinke, D J Kowalewski, S Bernatz, J Tichy, M W Ronellenfitsch, F Thorsen, A Berger, M T Forster, A Muller, J P Steinbach, R Beschorner, J Wischhusen, H M Kvasnicka, K H Plate, S Stefanovic, B Weide, M Mittelbronn, P N Harter. "CD74 regulates complexity of tumor cell HLA class II peptidome in brain metastasis and is a positive prognostic marker for patient survival.", Acta Neuropathologica Communications, 6 - (1) - 18, 10.1186/s40478-018-0521-5
  • Franz Maximilian Rasche, Ronny Rettig, Thomas Frese, Wilma Gertrud Rasche, Filip Barinka, Guenter Roesl, Frieder Keller, Tom H. Lindner, Jochen G. Schneider, Joachim Beige, Thomas Ebert, Stephan Schiekofer. "The Pituitary-Thyroid Axis and Prolactin Secretion in Hemodialysis Patients in Two Endemic Regions of Eastern Germany: Morphologic and laboratory abnormalities of the thyroid gland in CKD5D patients", Experimental And Clinical Endocrinology & Diabetes, 126 - (6) - 349-356, 10.1055/s-0043-123184
  • Elizabeth Brunk, Swagatika Sahoo, Daniel C Zielinski, Ali Altunkaya, Andreas Drager, Nathan Mih, Francesco Gatto, Avlant Nilsson, German Andres Preciat Gonzalez, Maike Kathrin Aurich, Andreas Prlic, Anand Sastry, Anna D Danielsdottir, Almut Heinken, Alberto Noronha, Peter W Rose, Stephen K Burley, Ronan M T Fleming, Jens Nielsen, Ines Thiele, Bernhard O Palsson. "Recon3D enables a three-dimensional view of gene variation in human metabolism.", Nature Biotechnology, 36 - (3) - 272-281, 10.1038/nbt.4072
  • Lisa Kramer, Christian Jager, Jean-Pierre Trezzi, Doris M Jacobs, Karsten Hiller. "Quantification of Stable Isotope Traces Close to Natural Enrichment in Human Plasma Metabolites Using Gas Chromatography-Mass Spectrometry.", Metabolites, 8 - (1) - 10.3390/metabo8010015
  • Marisa Flook, Jose A. Lopez Escamez. "Meniere’s Disease: Genetics and the Immune System", Current Otorhinolaryngology Reports, 1-8, 10.1007/s40136-018-0182-8
  • Sylvie Delhalle, Sebastian F N Bode, Rudi Balling, Markus Ollert, Feng Q He. "A roadmap towards personalized immunology.", Npj Systems Biology And Applications, 4 - 9, 10.1038/s41540-017-0045-9
  • Andreas Husch, Mikkel V Petersen, Peter Gemmar, Jorge Goncalves, Niels Sunde, Frank Hertel. "Post-operative deep brain stimulation assessment: Automatic data integration and report generation.", Brain Stimulation, 11 - (4) - 863-866, 10.1016/j.brs.2018.01.031
  • Pablo Roman-Naranjo, Alvaro Gallego-Martinez, Jose A Lopez Escamez. "Genetics of vestibular syndromes.", Current Opinion In Neurology, 31 - (1) - 105-110, 10.1097/WCO.0000000000000519
  • Stella Blasel, Rieke Vorwerk, Makoto Kiyose, Michel Mittelbronn, Uta Brunnberg, Hanns Ackermann, Martin Voss, Patrick N Harter, Elke Hattingen. "New MR perfusion features in primary central nervous system lymphomas: pattern and prognostic impact.", Journal Of Neurology, 265 - (3) - 647-658, 10.1007/s00415-018-8737-7
  • Tanja Eisemann, Barbara Costa, Jens Strelau, Michel Mittelbronn, Peter Angel, Heike Peterziel. "An advanced glioma cell invasion assay based on organotypic brain slice cultures.", Bmc Cancer, 18 - (1) - 103, 10.1186/s12885-018-4007-4
  • Meng Hu, Erik Muller, Emma L Schymanski, Christoph Ruttkies, Tobias Schulze, Werner Brack, Martin Krauss. "Performance of combined fragmentation and retention prediction for the identification of organic micropollutants by LC-HRMS.", Analytical And Bioanalytical Chemistry, 410 - (7) - 1931-1941, 10.1007/s00216-018-0857-5
  • S B Larsen, Z Hanss, R Kruger. "The genetic architecture of mitochondrial dysfunction in Parkinson's disease.", Cell And Tissue Research, 373 - (1) - 21-37, 10.1007/s00441-017-2768-8
  • Jieqiang Wei, Silun Zhang, Antonio Adaldo, Johan Thunberg, Xiaoming Hu, Karl H. Johansson. "Finite-Time Attitude Synchronization with Distributed Discontinuous Protocols", Ieee Transactions On Automatic Control, 10.1109/TAC.2018.2797179
  • Mark McCormack, Hongsheng Gui, Andrés Ingason, Doug Speed, Galen EB Wright, Eunice J Zhang, Rodrigo Secolin, Clarissa Yasuda, Maxwell Kwok, Stefan Wolking, Felicitas Becker, Sarah Rau, Andreja Avbersek, Kristin Heggeli, Costin Leu, Chantal Depondt, Graeme J Sills, Anthony G Marson, Pauls Auce, Martin J Brodie, Ben Francis, Michael R Johnson, Bobby PC Koeleman,, Pasquale Striano, Antonietta Coppola, Federico Zara, Wolfram S Kunz, Josemir W Sander, Holger Lerche, Karl Martin Klein, Sarah Weckhuysen, Martin Krenn, Lárus J Gudmundsson, Kári Stefánsson, Roland Krause, Neil Shear, Colin JD Ross, Norman Delanty, Munir Pirmohamed, Bruce C Carleton, Fernando Cendes, Iscia Lopes-Cendes, Wei-ping Liao, Terence J O'Brien, Sanjay M Sisodiya, Stacey Cherny, Patrick Kwan, Larry Baum, Gianpiero L Cavalleri, EPIGEN Consortium, EpiPGX Consortium. "Genetic variation in CFH predicts phenytoin-induced maculopapular exanthema in European-descent patients", Neurology, 90 - (4) - 10.1212/WNL.0000000000004853
  • Claudia Saraceno, Marcella Catania, Anna Paterlini, Silvia Fostinelli, Miriam Ciani, Roberta Zanardini, Giuliano Binetti, Giuseppe Di Fede, Paola Caroppo, Luisa Benussi, Roberta Ghidoni, Silvia Bolognin. "Altered Expression of Circulating Cdc42 in Frontotemporal Lobar Degeneration.", Journal Of Alzheimers Disease, 61 - (4) - 1477-1483, 10.3233/JAD-170722
  • Dheeraj R Bobbili, Denis Lal, Patrick May, Eva M Reinthaler, Kamel Jabbari, Holger Thiele, Michael Nothnagel, Wiktor Jurkowski, Martha Feucht, Peter Nurnberg, Holger Lerche, Fritz Zimprich, Roland Krause, Bernd A Neubauer, Hannelore Steinbock, Birgit Neophytou, Julia Geldner, Ursula Gruber-Sedlmayr, Edda Haberlandt, Gabriel M Ronen, Janine Altmuller, Thomas Sander, Rudi Balling, EUROEPINOMICS COGIE Consortium, Eva M Reinthaler, Fritz Zimprich, Martha Feucht, Dennis Lal, Peter Nurnberg, Holger Thiele, Roland Krause, Patrick May, Holger Lerche, Bernd A Neubauer. "Exome-wide analysis of mutational burden in patients with typical and atypical Rolandic epilepsy.", European Journal Of Human Genetics, 26 - (2) - 258-264, 10.1038/s41431-017-0034-x
  • Jigisha Anupama, Margherita Francescatto, Farzana Rahman, Nazeefa Fatima, Dan DeBlasio, Avinash Kumar Shanmugam, Venkata Satagopam, Alberto Santos, Pandurang Kolekar, Magali Michaut, Emre Guney. "The ISCB Student Council Internship Program: Expanding computational biology capacity worldwide.", Plos Computational Biology, 14 - (1) - e1005802, 10.1371/journal.pcbi.1005802
  • Cian J Lynch, Raquel Bernad, Isabel Calvo, Sandrina Nobrega-Pereira, Sergio Ruiz, Nuria Ibarz, Ana Martinez-Val, Osvaldo Grana-Castro, Gonzalo Gomez-Lopez, Eduardo Andres-Leon, Vladimir Espinosa Angarica, Antonio Del Sol, Sagrario Ortega, Oscar Fernandez-Capetillo, Enrique Rojo, Javier Munoz, Manuel Serrano. "The RNA Polymerase II Factor RPAP1 Is Critical for Mediator-Driven Transcription and Cell Identity.", Cell Reports, 22 - (2) - 396-410, 10.1016/j.celrep.2017.12.062

Report

  • Theodore Alexandrov, Sebastian Böcker, Pieter Dorrestein, Emma Schymanski. "Computational Metabolomics: Identification, Interpretation, Imaging", Dagstuhl Seminar 17491, Dagstuhl Reports, 7 - (12) - 10.4230/DagRep.7.12.1

 

2017

Book

  • Wahid Ali, Duong Pham Luu Trung, Muhammad Abdul Qyyum, Alam Nawaz, Moonyong Lee. "Measuring the effect on chemical processes due to uncertain input states: Uncertainty-cum-sensitivity analysis using a gPC approach", Computer Aided Chemical Engineering - Part of series 27th European Symposium on Computer Aided Process Engineering, 40 - 439-444, 10.1016/B978-0-444-63965-3.50075-1

Book Series

  • Joachim Kutzera, Patrick May. "Variant-DB: A tool for efficiently exploring millions of human genetic variants and their annotations", Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 10649 LNBI - 22-28, 10.1007/978-3-319-69751-2_3
  • Marcos Da Silveira, Cédric Pruski, Reinhard Schneider. "Data Integration in the Life Sciences", 10.1007/978-3-319-69751-2
  • Vladimir Espinosa Angarica, Antonio Del Sol. "Bioinformatics Tools for Genome-Wide Epigenetic Research.", Neuroepigenomics in Aging and Disease, 978 - 489-512, 10.1007/978-3-319-53889-1_25

Conference Proceeding

  • Lisa-Marie Neupert, Patrick May, Katja Kobow, Michael Nothnagel, Peter Nürnberg, Thomas Freiman, Patrick Harter, Karl-Martin Klein, Yvonne Weber, Ingmar Blümcke, Dennis Lal. "Discovery and pathogenicity assessment of neuropathology-associated gene variants", Special Issue: 32nd International Epilepsy Congress Barcelona, Spain 2nd – 6th September 2017, Epilepsia, 58 - (Issue Supplement S5) - S174, 10.1111/epi.13944
  • Florian Bernard, Frank R. Schmidt, Johan Thunberg, Daniel Cremers. "A combinatorial solution to non-rigid 3D shape-to-image matching", Proceedings - 30th IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2017, 2017-January - 1436-1445, 10.1109/CVPR.2017.157
  • Bittenbring J.T., Kaysen A., Heintz-Buschart A., Graf N., Simon A., Franke K., Wilmes P., Schneider J.. "Changes in the gastrointestinal microbiome during cancer treatments", Jahrestagung Der Deutschen, Österreichischen Und Schweizerischen Gesellschaften Für Hämatologie Und Medizinische Onkologie, Stuttgart, 29. September-3. Oktober 2017: Abstracts, Oncology Research And Treatment, 40 Suppl 3 - 41, 10.1159/000479566
  • Dheeraj Bobbili, Patrick May, Rejko Krüger. "Rare variant analysis of the PPMI dataset to uncover the complex genetic architecture of Parkinson’s disease", Abstracts of the 21 International Congress of Parkinson's Disease and Movement Disorders, Movement Disorders, 32 Suppl 2 - S1-S1079, 10.1002/mds.27087
  • Daniela Hartl, Patrick May, Wei Gu, Manuel Mayhaus, Enrico Glaab, Paul Antony, Dheeraj Bobbili, Sandra Koeglsberger, Sabrina Pichler, Christian Spaniol, Alexander Kurz, Rudi Balling, Jochen Schneider, Matthias Riemenschneider. "Identification of a rare gene variant that is associated with familial alzheimer disease and regulates app expression", Alzheimers & Dementia, 13 - (7) - P648, 10.1016/j.jalz.2017.06.758
  • A. Kishore, M. Sturm, A. Sreelatha, S. Robert, S. Krishnan, M. Banerjee, O. Riess, P. Bauer, R. Kruger, T. Gasser, M. Sharma. "Understanding the role of LRRK2 in Indian population", Abstracts of the 21 International Congress of Parkinson's Disease and Movement Disorders, Movement Disorders, 32 Supplement S2 - 
  • Andreas Husch, Peter Gemmar, Johan Thunberg, Frank Hertel. "Integration of sparse electrophysiological measurements with preoperative MRI using 3D surface estimation in deep brain stimulation surgery", Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 10135 - 10.1117/12.2255894

Editorial

  • Jonas Walter, Sarah Louise Nickels, Jens Christian Schwamborn. "Human induced pluripotent stem cell-derived neuronal progenitors are a suitable and effective drug discovery model for neurological mtDNA disorders.", Stem Cell Investigation, 4 - (12) - 101, 10.21037/sci.2017.11.08

Journal

  • B.Y. Loulou Peisl, Emma L. Schymanski, Paul Wilmes. "Dark matter in host-microbiome metabolomics: Tackling the unknowns - A review", Analytica Chimica Acta, 10.1016/j.aca.2017.12.034
  • Wahid Ali, Pham Luu Trung Duong, Mohd Shariq Khan, Mesfin Getu, Moonyong Lee. "Measuring the reliability of a natural gas refrigeration plant: Uncertainty propagation and quantification with polynomial chaos expansion based sensitivity analysis", Reliability Engineering & System Safety, 172 - 103-117, 10.1016/j.ress.2017.12.009
  • Stefania Magnusdottir, Ines Thiele. "Modeling metabolism of the human gut microbiome.", Current Opinion In Biotechnology, 51 - 90-96, 10.1016/j.copbio.2017.12.005
  • Lidia Frejo, Teresa Requena, Satoshi Okawa, Alvaro Gallego-Martinez, Manuel Martinez-Bueno, Ismael Aran, Angel Batuecas-Caletrio, Jesus Benitez-Rosario, Juan M.Espinosa-Sanchez, Jesus José Fraile-Rodrigo, Ana Maria Garcia-Arumi, Rocio Honzalez-Aguado, Pedro Marques, Eduardo Martin-Sanz, Nicolas Perez-Fernandez, Paz Pérez-Vazquez, Herminio Perez-Garrigues, Sofia Santos-Perez, Andres Soto-Varela, Maria C. Tapia, Gabriel Trinidad-Ruiz, Antonio del Sol, Marta E. Alcaron Riquelme, Jose A. Lopez-Escamez. "Regulation of Fn14 Receptor and NF-κB Underlies Inflammation in Meniere’s Disease", Frontiers In Immunology, 8 - (DEC) - 1739, 10.3389/fimmu.2017.01739
  • Vidisha Singh, Marek Ostaszewski, George D Kalliolias, Gilles Chiocchia, Robert Olaso, Elisabeth Petit-Teixeira, Tomas Helikar, Anna Niarakis. "Computational Systems Biology Approach for the Study of Rheumatoid Arthritis: From a Molecular Map to a Dynamical Model.", Genomics And Computational Biology, 4 - (1) - e100050, 10.18547/gcb.2018.vol4.iss1.e100050
  • Johanna Wagner, Franca Vulinović, Anne Grünewald, Marcus M. Unger, Jens C. Möller, Christine Klein, Patrick P. Michel, Vincent Ries, Wolfgang H. Oertel, Daniel Alvarez-Fischer. "Acylated and unacylated ghrelin confer neuroprotection to mesencephalic neurons", Neuroscience, 365 - 137-145, 10.1016/j.neuroscience.2017.09.045
  • Enrico Glaab. "Computational systems biology approaches for Parkinson's disease.", Cell And Tissue Research, 373 - (1) - 91-109, 10.1007/s00441-017-2734-5
  • Rodrigo P. Soares, Patrícia Xander, Adriana Oliveira Costa, Antonio Marcilla, Armando Menezes-Neto, Hernando Del Portillo, Kenneth Witwer, Marca Wauben, Esther Nolte-T Hoen, Martin Olivier, Miriã Ferreira Criado, Luis Lamberti P. da Silva, Munira Muhammad Abdel Baqui, Sergio Schenkman, Walter Colli, Maria Julia Manso Alves, Karen Spadari Ferreira, Rosana Puccia, Peter Nejsum, Kristian Riesbeck, Allan Stensballe, Eline Palm Hansen, Lorena Martin Jaular, Reidun Øvstebø, Laura de la Canal, Paolo Bergese, Vera Pereira-Chioccola, Michael W. Pfaffl, Joëlle Fritz, Yong Song Gho, Ana Claudia Torrecilhas. "Highlights of the São Paulo ISEV workshop on extracellular vesicles in cross-kingdom communication", Journal Of Extracellular Vesicles, 6 - (1) - 1407213, 10.1080/20013078.2017.1407213
  • Anna Heintz-Buschart, Paul Wilmes. "Human Gut Microbiome: Function Matters.", Trends In Microbiology, 26 - (7) - 563-574, 10.1016/j.tim.2017.11.002
  • Johanna Nyffeler, Petra Chovancova, Xenia Dolde, Anna-Katharina Holzer, Vladimir Purvanov, Ilona Kindinger, Anna Kerins, David Higton, Steve Silvester, Barbara M A van Vugt-Lussenburg, Enrico Glaab, Bart van der Burg, Richard Maclennan, Daniel F Legler, Marcel Leist. "A structure-activity relationship linking non-planar PCBs to functional deficits of neural crest cells: new roles for connexins.", Archives Of Toxicology, 92 - (3) - 1225-1247, 10.1007/s00204-017-2125-4
  • Stephan Christel, Malte Herold, Soren Bellenberg, Mohamed El Hajjami, Antoine Buetti-Dinh, Igor V Pivkin, Wolfgang Sand, Paul Wilmes, Ansgar Poetsch, Mark Dopson. "Multi-omics reveal the lifestyle of the acidophilic, mineral-oxidizing model species Leptospirillum ferriphilum(T).", Applied And Environmental Microbiology, 84 - (3) - e02091-17, 10.1128/AEM.02091-17
  • Francois Le Guerroue, Franziska Eck, Jennifer Jung, Tatjana Starzetz, Michel Mittelbronn, Manuel Kaulich, Christian Behrends. "Autophagosomal Content Profiling Reveals an LC3C-Dependent Piecemeal Mitophagy Pathway", Molecular Cell, 68 - (4) - 786-796.e6, 10.1016/j.molcel.2017.10.029
  • Hassan Salem, Eugen Bauer, Roy Kirsch, Aileen Berasategui, Michael Cripps, Benjamin Weiss, Ryuichi Koga, Kayoko Fukumori, Heiko Vogel, Takema Fukatsu, Martin Kaltenpoth. "Drastic Genome Reduction in an Herbivore's Pectinolytic Symbiont.", Cell, 171 - (7) - 1520-1531.e13, 10.1016/j.cell.2017.10.029
  • Marcel Kraemer, Marcin Krawczyk, Frank Grünhage, Frank Lammert, Jochen Schneider. "Increased VAP-1 concentration and activity are associated with liver fibrosis in chronic Hepatitis C: P063", Clinical Chemistry And Laboratory Medicine, 
  • Ronald Biemann, Philippe Lucarelli, Nguen Thanh-Phuong, Aurélien Ginolhac, Katrin Borucki, Thomas Sauter, Jochen G. Schneider, Berend Isermann. "Fat tissue specific microRNA expression in individuals with metabolic syndrome following lifestyle-induced weight loss: P100", Clinical Chemistry And Laboratory Medicine, 
  • Cristina Elena Niturad, Dorit Lev, Vera M Kalscheuer, Agnieszka Charzewska, Julian Schubert, Tally Lerman-Sagie, Hester Y Kroes, Renske Oegema, Monica Traverso, Nicola Specchio, Maria Lassota, Jamel Chelly, Odeya Bennett-Back, Nirit Carmi, Tal Koffler-Brill, Michele Iacomino, Marina Trivisano, Giuseppe Capovilla, Pasquale Striano, Magdalena Nawara, Sylwia Rzonca, Ute Fischer, Melanie Bienek, Corinna Jensen, Hao Hu, Holger Thiele, Janine Altmuller, Roland Krause, Patrick May, Felicitas Becker, Rudi Balling, Saskia Biskup, Stefan A Haas, Peter Nurnberg, Koen L I van Gassen, Holger Lerche, Federico Zara, Snezana Maljevic, Esther Leshinsky-Silver, EuroEPINOMICS Consortium. "Rare GABRA3 variants are associated with epileptic seizures, encephalopathy and dysmorphic features.", Brain, 140 - (11) - 2879-2894, 10.1093/brain/awx236
  • Maria G Stathopoulou, Ting Xie, Daniela Ruggiero, Jerome Chatelin, Marc Rancier, George Weryha, Mary Jo Kurth, Alex-Ander Aldasoro Arguinano, Vesna Gorenjak, Alexandros M Petrelis, Georges Dagher, George Dedoussis, Panagiotis Deloukas, John Lamont, Janja Marc, Maurizio Simmaco, Ron H N van Schaik, Federico Innocenti, Jean-Louis Merlin, Jochen Schneider, Behrooz Ziad Alizadeh, Marina Ciullo, Sudha Seshadri, Sophie Visvikis-Siest, VEGF Consortium. "A transnational collaborative network dedicated to the study and applications of the vascular endothelial growth factor-A in medical practice: the VEGF Consortium.", Clinical Chemistry And Laboratory Medicine, 56 - (4) - 83-86, 10.1515/cclm-2017-0838
  • G. Winterer, G. Androsova, O. Bender, D. Boraschi, F. Borchers, T.B. Dschietzig, I. Feinkohl, P. Fletcher, J. Gallinat, D. Hadzidiakos, J.D. Haynes, F. Heppner, S. Hetzer, J. Hendrikse, B. Ittermann, I.M.J. Kant, A. Kraft, A. Krannich, R. Krause, S. Kühn, G. Lachmann, S.J.T. van Montfort, A. Müller, P. Nürnberg, K. Ofosu, M. Pietsch, T. Pischon, J. Preller, E. Renzulli, K. Scheurer, R. Schneider, A.J.C. Slooter, C. Spies, E. Stamatakis, H.D. Volk, S. Weber, A. Wolf, F. Yürek, N. Zacharias. "Personalized risk prediction of postoperative cognitive impairment – rationale for the EU-funded BioCog project", European Psychiatry, 50 - 34-39, 10.1016/j.eurpsy.2017.10.004
  • Lidia Santos Silva, Gernot Poschet, Yannic Nonnenmacher, Holger M Becker, Sean Sapcariu, Ann-Christin Gaupel, Magdalena Schlotter, Yonghe Wu, Niclas Kneisel, Martina Seiffert, Rudiger Hell, Karsten Hiller, Peter Lichter, Bernhard Radlwimmer. "Branched-chain ketoacids secreted by glioblastoma cells via MCT1 modulate macrophage phenotype.", Embo Reports, 18 - (12) - 2172-2185, 10.15252/embr.201744154
  • Kenneth W Ellens, Nils Christian, Charandeep Singh, Venkata P Satagopam, Patrick May, Carole L Linster. "Confronting the catalytic dark matter encoded by sequenced genomes.", Nucleic Acids Research, 45 - (20) - 11495-11514, 10.1093/nar/gkx937
  • Emilie E L Muller, Shaman Narayanasamy, Myriam Zeimes, Cedric C Laczny, Laura A Lebrun, Malte Herold, Nathan D Hicks, John D Gillece, James M Schupp, Paul Keim, Paul Wilmes. "First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ.", Standards In Genomic Sciences, 12 - (1) - 64, 10.1186/s40793-017-0274-y
  • Marlieke Scholten, Johannes Klemt, Melanie Heilbronn, Christian Plewnia, Bastiaan R Bloem, Friedemann Bunjes, Rejko Kruger, Alireza Gharabaghi, Daniel Weiss. "Effects of Subthalamic and Nigral Stimulation on Gait Kinematics in Parkinson's Disease.", Frontiers In Neurology, 8 - (OCT) - 543, 10.3389/fneur.2017.00543
  • Marie Ludwig, Paul Wilmes, Stefan Schrader. "Measuring soil sustainability via soil resilience.", Science Of The Total Environment, 626 - 1484-1493, 10.1016/j.scitotenv.2017.10.043
  • Jiaxu Wang, Piroon Jenjaroenpun, Akshay Bhinge, Vladimir Espinosa Angarica, Antonio Del Sol, Intawat Nookaew, Vladimir A Kuznetsov, Lawrence W Stanton. "Single-cell gene expression analysis reveals regulators of distinct cell subpopulations among developing human neurons.", Genome Research, 27 - (11) - 1783-1794, 10.1101/gr.223313.117
  • Andreas Husch, Mikkel V Petersen, Peter Gemmar, Jorge Goncalves, Frank Hertel. "PaCER - A fully automated method for electrode trajectory and contact reconstruction in deep brain stimulation.", Neuroimage-Clinical, 17 - 80-89, 10.1016/j.nicl.2017.10.004
  • Letizia Straniero, Valeria Rimoldi, Maura Samarani, Stefano Goldwurm, Alessio Di Fonzo, Rejko Kruger, Michela Deleidi, Massimo Aureli, Giulia Solda, Stefano Duga, Rosanna Asselta. "The GBAP1 pseudogene acts as a ceRNA for the glucocerebrosidase gene GBA by sponging miR-22-3p.", Scientific Reports, 7 - (1) - 12702, 10.1038/s41598-017-12973-5
  • Wei Pan, Ye Yuan, Lennart Ljung, Jorge Goncalves, Guy Bart Stan. "Identification of Nonlinear State-Space Systems from Heterogeneous Datasets", Ieee Transactions On Control Of Network Systems, 5 - (2) - 737-747, 10.1109/TCNS.2017.2758966
  • Jonathan Arias-Fuenzalida, Javier Jarazo, Xiaobing Qing, Jonas Walter, Gemma Gomez-Giro, Sarah Louise Nickels, Holm Zaehres, Hans Robert Scholer, Jens Christian Schwamborn. "FACS-Assisted CRISPR-Cas9 Genome Editing Facilitates Parkinson's Disease Modeling.", Stem Cell Reports, 9 - (5) - 1423-1431, 10.1016/j.stemcr.2017.08.026
  • Angelo Antonini, Werner Poewe, K. Ray Chaudhuri, Robert Jech, Barbara Pickut, Zvezdan Pirtošek, Jozsef Szasz, Francesc Valldeoriola, Christian Winkler, Lars Bergmann, Ashley Yegin, Koray Onuk, David Barch, Per Odin, Ene Amalia, Guy Arnold, Ovidiu Bajenaru, Bruno Bergmans, Kari Anne Bjornara, Jeff Blackie, Matthias Bode, Paul Bourgeois, Stephan Bohlhalter, Ioan Buraga, Pierre R. Burkhard, Philippe Busson, Matilde Calopa, Jesper Clausen, Erik Hvid Danielsen, Luc Defebvre, Valerie Delvaux, Sophie Dethy, Espen Dietrichs, Oriol De Fabregues, Ransmayr Gerhard, Graziano Gusmaroli, Kirsten Hahn, Björn Hauptmann, Tove Henriksen, Jorge Hernandez-Vara, A. Jeanjean, Michaela Kaiserova, Jan Kassubek, Thomas Kimber, Spyridon Konitsiotis, Rejko Krüger, Jaime Kulisevsky, Jo Leenders, Christofer Lundqvist, F. Ory Magne, Pietro Marano, Ivan Milanov, Nicola Modugno, Anjum Misbahuddin, Martin Nevrly, Zikos Panayiotis, Kenn Freddy Pedersen, Stephen W. Pedersen, Lacramioara Perju-Dumbrava, M. M. Ponsen, Bogdan O. Popescu, Michel Rijntjes, V. Puente, Christoph Redecker, Christoph Schrader, Mariachiara Sensi, Mihaela Simu, Cleanthe Spanaki, Alexander Storch, Anette Storstein, Volker Tomantschger, Chris van der Linden, T. van Laar, F. Viallet, Tatiana Witjas, Martin Wolz, Maurizio Zibetti, Michel Van Zandijcke. "Levodopa-carbidopa intestinal gel in advanced Parkinson's: Final results of the GLORIA registry", Parkinsonism & Related Disorders, 45 - 13-20, 10.1016/j.parkreldis.2017.09.018
  • Ines Santolini, Roberta Celli, Milena Cannella, Tiziana Imbriglio, Michela Guiducci, Pasquale Parisi, Julian Schubert, Michele Iacomino, Federico Zara, Holger Lerche, EuroEPINOMICS CoGIE Consortium, Genetic Commission of Italian League Against Epilepsy (LICE), Slavianka Moyanova, Richard Teke Ngomba, Gilles van Luijtelaar, Giuseppe Battaglia, Valeria Bruno, Pasquale Striano, Ferdinando Nicoletti. "Alterations in the alpha2 delta ligand, thrombospondin-1, in a rat model of spontaneous absence epilepsy and in patients with idiopathic/genetic generalized epilepsies.", Epilepsia, 10.1111/epi.13898
  • Jia Chen Hua, Farzad Noorian, Duncan Moss, Philip H.W. Leong, Gemunu H. Gunaratne. "High-dimensional time series prediction using kernel-based Koopman mode regression", Nonlinear Dynamics, 90 - (3) - 1785-1806, 10.1007/s11071-017-3764-y
  • Johan Markdahl, Johan Thunberg, Jorge Goncalves. "Almost Global Consensus on the n-Sphere", Ieee Transactions On Automatic Control, 63 - (6) - 1664-1675, 10.1109/TAC.2017.2752799
  • Lena F Burbulla, Pingping Song, Joseph R Mazzulli, Enrico Zampese, Yvette C Wong, Sohee Jeon, David P Santos, Judith Blanz, Carolin D Obermaier, Chelsee Strojny, Jeffrey N Savas, Evangelos Kiskinis, Xiaoxi Zhuang, Rejko Kruger, D James Surmeier, Dimitri Krainc. "Dopamine oxidation mediates mitochondrial and lysosomal dysfunction in Parkinson's disease.", Science, 357 - (6357) - 1255-1261, 10.1126/science.aam9080
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